Package: mSigTools
Type: Package
Title: Mutational Signature Analysis Tools
Version: 1.0.8
Authors@R: 
    c(person(given = "Steven",
             family = "Rozen",
             role = c("aut", "cre"),
             email = "steverozen@pm.me",
             comment = c(ORCID = "0000-0002-4288-0056")),
      person(given = "Nanhai",
             family = "Jiang",
             role = "aut",
             comment = c(ORCID = "0000-0003-4974-2753")))
Description: Utility functions for mutational signature analysis as
        described in Alexandrov, L. B. (2020)
        <doi:10.1038/s41586-020-1943-3>. This package provides two
        groups of functions. One is for dealing with mutational
        signature "exposures" (i.e. the counts of mutations in a sample
        that are due to each mutational signature). The other group of
        functions is for matching or comparing sets of mutational
        signatures. 'mSigTools' stands for mutational Signature
        analysis Tools.
License: GPL-3
URL: https://github.com/Rozen-Lab/mSigTools
BugReports: https://github.com/Rozen-Lab/mSigTools/issues
Encoding: UTF-8
Language: en-US
RoxygenNote: 7.2.3
Imports: clue, philentropy, quadprog, sets
Suggests: cosmicsig, ICAMS, spelling, testthat (>= 3.0.0),
Config/testthat/edition: 3
Config/pak/sysreqs: make
Repository: https://rozen-lab.r-universe.dev
Date/Publication: 2024-04-13 08:02:46 UTC
RemoteUrl: https://github.com/rozen-lab/msigtools
RemoteRef: HEAD
RemoteSha: 49ca85b0117e10a1ecd510998d54dc4426b29561
NeedsCompilation: no
Packaged: 2026-07-03 21:48:58 UTC; root
Author: Steven Rozen [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-4288-0056>),
  Nanhai Jiang [aut] (ORCID: <https://orcid.org/0000-0003-4974-2753>)
Maintainer: Steven Rozen <steverozen@pm.me>