Package: cosmicsig 1.3.1
Steven Rozen
cosmicsig: Mutational Signatures from COSMIC (Catalogue of Somatic Mutations in Cancer)
A data package with 2 main package variables: 'signature' and 'etiology'. The 'signature' variable contains the latest mutational signature profiles released on COSMIC <https://cancer.sanger.ac.uk/signatures/> for 3 mutation types: * Single base substitutions in the context of preceding and following bases, * Doublet base substitutions, and * Small insertions and deletions. 'cosmicsig' stands for COSMIC signatures. Please run ?'cosmicsig' for more information.
Authors:
cosmicsig_1.3.1.tar.gz
cosmicsig_1.3.1.zip(r-4.7)cosmicsig_1.3.1.zip(r-4.6)cosmicsig_1.3.1.zip(r-4.5)
cosmicsig_1.3.1.tgz(r-4.6-any)cosmicsig_1.3.1.tgz(r-4.5-any)
cosmicsig_1.3.1.tar.gz(r-4.7-any)cosmicsig_1.3.1.tar.gz(r-4.6-any)
cosmicsig_1.3.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
cosmicsig/json (API)
NEWS
| # Install 'cosmicsig' in R: |
| install.packages('cosmicsig', repos = c('https://rozen-lab.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rozen-lab/cosmicsig/issues
- COSMIC_v3.0 - Mutational signatures data from COSMIC, Catalogue Of Somatic Mutations In Cancer
- COSMIC_v3.1 - Mutational signatures data from COSMIC, Catalogue Of Somatic Mutations In Cancer
- COSMIC_v3.2 - Mutational signatures data from COSMIC, Catalogue Of Somatic Mutations In Cancer
- COSMIC_v3.3 - Mutational signatures data from COSMIC, Catalogue Of Somatic Mutations In Cancer
- COSMIC_v3.4 - Mutational signatures data from COSMIC, Catalogue Of Somatic Mutations In Cancer
- COSMIC_v3.5 - Mutational signatures data from COSMIC, Catalogue Of Somatic Mutations In Cancer
- etiology - List of mutational signatures' proposed etiology summarized from COSMIC, Catalogue Of Somatic Mutations In Cancer
- signature - Mutational signatures data from COSMIC, Catalogue Of Somatic Mutations In Cancer
Last updated from:bfaadaab44. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 121 | ||
| source / vignettes | OK | 139 | ||
| linux-release-x86_64 | OK | 112 | ||
| macos-release-arm64 | OK | 226 | ||
| macos-oldrel-arm64 | OK | 158 | ||
| windows-devel | OK | 110 | ||
| windows-release | OK | 67 | ||
| windows-oldrel | OK | 72 | ||
| wasm-release | OK | 104 |
Exports:get_etiologypossible_artifactsrare_signaturesSBS96_ID_to_SBS192_ID
Dependencies:
